Hello MaSH, does anyone have any experience converting Thermo .raw files from profile to centroid? I have inadvertently acquired some very important data in the former and need it in the latter.
You could convert the .raw file from thermo by the msconvertGUI.
Our metabolomics.uoa.auckland.ac.nz VM has the latest version of that.
below is a short induction picture to show you how to use it.